Find and compare 2 Star hotels in South San Diego

Name: Best Western Yacht Harbor Hotel
Price range: $123 total
Rating: 8.4

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Top South San Diego 2 Star hotels

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

2485 Hotel Circle Place, San Diego, CA

Fully refundableReserve now, pay when you stay

$127 nightly

$146 total

Oct 26 - Oct 27

Total with taxes and fees

This hotel features an outdoor pool and a gym. Business travelers can take advantage of the free WiFi in public areas. Enjoy the hot tub and free full breakfast ...

8/10 Very Good! (2,106 reviews)

"For the price you can't beat it! Great friendly staff, the breakfast was terrific, awesome location and comfortable. There were some maintenance issues or I would give it a higher rating."

Reviewed on Sep 24, 2025

California Suites Hotel

5415 Clairemont Mesa Blvd, San Diego, CA

Fully refundableReserve now, pay when you stay

$80 nightly

$92 total

Oct 5 - Oct 6

Total with taxes and fees

This hotel features an outdoor pool and a hot tub. Traveling on business? Take advantage of the free WiFi in public areas and free internet in public areas. ...

7.6/10 Good! (2,060 reviews)

"Location and friendly people"

Reviewed on Sep 24, 2025

Kings Inn San Diego

1333 Hotel Cir S, San Diego, CA

Fully refundableReserve now, pay when you stay

$84 nightly

$96 total

Oct 30 - Oct 31

Total with taxes and fees

This Art Deco hotel includes 2 restaurants, an outdoor pool, and a hot tub. Enjoy the gym and perks like free WiFi. A bar/lounge, a 24-hour front desk, and a ...

8.8/10 Excellent! (3,471 reviews)

"Muy amables las personas"

Reviewed on Sep 28, 2025

Extended Stay America San Diego - Sorrento Mesa

San Diego

Fully refundableReserve now, pay when you stay

$104 nightly

$120 total

Oct 19 - Oct 20

Total with taxes and fees

This hotel features free WiFi in public areas, laundry facilities, and free self parking. Enjoy the free on-the-go breakfast each morning. A picnic area and ...

6.8/10 (1,007 reviews)

"Hotel staff was nice. The rooms where clean and very comfortable"

Reviewed on Sep 28, 2025

Heritage Inn San Diego

3333 Channel Way, San Diego, CA

Fully refundable

$62 nightly

$71 total

Oct 2 - Oct 3

Total with taxes and fees

An outdoor pool is featured at this hotel, along with free self parking. WiFi in public areas is free. Luggage storage is also provided.

7/10 Good! (1,052 reviews)

"I booked a room here for business and was very impressed with how well it worked out. The room was very clean and newly renovated and the location of the hotel was walkable to accommodate all my needs. Definitely staying again."

Reviewed on Sep 28, 2025

Hotel Palmeras Chula Vista

230 Broadway, Chula Vista, CA

Fully refundableReserve now, pay when you stay

$76 nightly

$84 total

Oct 1 - Oct 2

Total with taxes and fees

This hotel doesn't skimp on freebies - guests receive free WiFi and free self parking. Staff at the 24-hour front desk can provide around-the-clock ...

7/10 Good! (1,896 reviews)

"The only bad thing about the hotel was that the window AC was in the bathroom where it wouldn't get the room cold. The beds are okay not the best for comfort."

Reviewed on Sep 27, 2025

Motel 6 El Cajon, CA - San Diego

550 Montrose Court, I-8 at Magnolia Avenue Southbound, El Cajon, CA

Fully refundableReserve now, pay when you stay

$61 nightly

$68 total

Oct 5 - Oct 6

Total with taxes and fees

An outdoor pool, free self parking, and laundry facilities are featured at this motel. WiFi in public areas is free. A garden, a snack bar/deli, and a picnic ...

7.2/10 Good! (1,413 reviews)

"NA"

Reviewed on Sep 28, 2025

Hampton Inn San Diego/Mission Valley

2151 Hotel Circle South, San Diego, CA

Fully refundableReserve now, pay when you stay

$122 nightly

$141 total

Oct 6 - Oct 7

Total with taxes and fees

This hotel features an outdoor pool and a 24-hour gym. Traveling on business? Take advantage of the 24-hour business center and free WiFi in public areas. Enjoy ...

8.6/10 Excellent! (1,211 reviews)

"Very clean hotel and feel very safe."

Reviewed on Sep 26, 2025

GreenTree Inn San Diego Mission Bay

4540 Mission Bay Drive, San Diego, CA

Fully refundableReserve now, pay when you stay

$88 nightly

$101 total

Oct 26 - Oct 27

Total with taxes and fees

This hotel features an outdoor pool and a gym. Traveling on business? Take advantage of the business center and free WiFi in public areas. Guests will appreciate ...

7.8/10 Good! (1,721 reviews)

Great choice

"I was satisfied with my stay. Clean room, friendly staff. Highly recommended."

Reviewed on Sep 24, 2025

Best Western Yacht Harbor Hotel

5005 N Harbor Dr, San Diego, CA

Fully refundableReserve now, pay when you stay

$107 nightly

$123 total

Oct 19 - Oct 20

Total with taxes and fees

This hotel features an outdoor pool and a gym. Traveling on business? Take advantage of the 24-hour business center and free WiFi in public areas. Enjoy the ...

8.4/10 Very Good! (1,549 reviews)

"It was a very nice stay for one night"

Reviewed on Sep 28, 2025

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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

2 Star Hotels South San Diego

Looking to break out of your routine for some much needed rest and relaxation? Or maybe you’ve already decided it’s time for a trip and are trying to find affordable hotels in South San Diego that won’t bust your travel budget?

South San Diego 2 star hotels will give you everything you need to enjoy the city like a local, saving a ton of money so you can hit all the hot spots in town.

Have a delicious breakfast at your hotel to fuel up for your day of sightseeing, then enjoy amenities like fresh towels and linens, as well as a nice hot shower to unwind after a busy day of experiencing everything the city has to offer.

As you explore a new locale, or one you love to visit over and over, you can rest easy knowing you’re staying in a great hotel that lets you discover South San Diego and welcomes you back to a clean, comfortable room at night.

Browse Travelocity’s wide selection of 2 star hotels in South San Diego and find one that’s perfectly priced and places you next to all the best activities and sights. The town is your oyster, and we can help you seek out its secrets while sticking to your budget.