Find and compare 2 Star hotels in San Juan Island

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Oct 9 - Oct 11
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Oct 16 - Oct 18

Top San Juan Island 2 Star hotels

Best Western Plus Oak Harbor Hotel & Conference Center

Best Western Plus Oak Harbor Hotel & Conference Center

2.5 out of 5
33175 State Route 20 Oak Harbor WA
Fully refundableReserve now, pay when you stay
$145 nightly
The price is $162 total per night from Oct 18 to Oct 19
$162 total
Oct 18 - Oct 19
Total with taxes and fees
This hotel features an outdoor pool and a gym. Traveling on business? Take advantage of the 24-hour business center and free WiFi in public areas. Enjoy the ...
Opens in a new windowBest Western Plus Oak Harbor Hotel & Conference Center
The Orca Inn

The Orca Inn

2 out of 5
770 Mullis St Friday Harbor WA
Fully refundableReserve now, pay when you stay
$98 nightly
The price is $109 total per night from Oct 12 to Oct 13
$109 total
Oct 12 - Oct 13
Total with taxes and fees
This hotel doesn't skimp on freebies - guests receive free WiFi and free self parking. Luggage storage is also provided.
Opens in a new windowThe Orca Inn
Coachman Inn & Suites

Coachman Inn & Suites

2.5 out of 5
32959 Highway 20 Oak Harbor WA
Fully refundableReserve now, pay when you stay
$130 nightly
The price is $145 total per night from Nov 5 to Nov 6
$145 total
Nov 5 - Nov 6
Total with taxes and fees
This motel's 2 hot tubs and gym are among the featured amenities. Enjoy the seasonal outdoor pool and free perks like on-the-go breakfast and free self parking. ...
Opens in a new windowCoachman Inn & Suites
Auld Holland Inn

Auld Holland Inn

2.5 out of 5
33575 State Route 20 Oak Harbor WA
Fully refundableReserve now, pay when you stay
$87 nightly
The price is $97 total per night from Oct 22 to Oct 23
$97 total
Oct 22 - Oct 23
Total with taxes and fees
A gym, free self parking, and laundry facilities are featured at this hotel. Guests will appreciate free perks like continental breakfast and WiFi in public ...
Opens in a new windowAuld Holland Inn
Anacortes Inn

Anacortes Inn

2 out of 5
3006 Commercial Ave Anacortes WA
Fully refundableReserve now, pay when you stay
$99 nightly
The price is $112 total per night from Oct 14 to Oct 15
$112 total
Oct 14 - Oct 15
Total with taxes and fees
Free self parking is available and the motel's front desk is staffed around-the-clock. WiFi in public areas is free. A terrace is also provided.
8.8/10 Excellent! (628 reviews)
"Easy check in, clean rooms, and friendly staff."

Reviewed on Oct 6, 2026

Opens in a new windowAnacortes Inn
The Marina Inn

The Marina Inn

2.5 out of 5
3300 Commercial Ave Anacortes WA
Fully refundableReserve now, pay when you stay
$105 nightly
The price is $118 total per night from Oct 11 to Oct 12
$118 total
Oct 11 - Oct 12
Total with taxes and fees
A gym, free self parking, and laundry facilities are featured at this hotel. Guests will appreciate free perks like continental breakfast and WiFi in public ...
Opens in a new windowThe Marina Inn
Friday Harbor Suites

Friday Harbor Suites

2.5 out of 5
680 Spring Street Friday Harbor WA
Fully refundableReserve now, pay when you stay
$183 nightly
The price is $202 total per night from Oct 22 to Oct 23
$202 total
Oct 22 - Oct 23
Total with taxes and fees
A hot tub, free self parking, and concierge services are featured at this hotel. Guests will appreciate perks like free WiFi and a free ferry terminal shuttle. ...
Opens in a new windowFriday Harbor Suites
Rosario Resort

Rosario Resort

2 out of 5
1624 Rosario Rd Eastsound WA
Fully refundableReserve now, pay when you stay
$152 nightly
The price is $167 total per night from Nov 8 to Nov 9
$167 total
Nov 8 - Nov 9
Total with taxes and fees
A seasonal outdoor pool, free self parking, and laundry facilities are featured at this hotel. WiFi in public areas is free. Express check-out, luggage storage, ...
Opens in a new windowRosario Resort
Cap Sante Inn

Cap Sante Inn

2 out of 5
906 9th St Anacortes WA
Fully refundableReserve now, pay when you stay
$72 nightly
The price is $79 total per night from Oct 14 to Oct 15
$79 total
Oct 14 - Oct 15
Total with taxes and fees
Stay at this motel in Anacortes. Enjoy free WiFi, free parking, and cable TV channels. Popular attractions Cap Sante Boat Haven and The Apothecary Spa are located ...
8/10 Very Good! (267 reviews)
"The lady who runs the office had already left when I arrived to check-in (8pm). She told me to use the lock box to get my key. It didn’t work correctly & Linda (the mgr?) called me, screaming & yelling, that I must be doing something wrong (I wasn’t). She told me to “find somewhere else to stay” ..."

Reviewed on Oct 7, 2026

Opens in a new windowCap Sante Inn
San Juan Motel

San Juan Motel

2 out of 5
1103 6th St. Anacortes WA
Fully refundableReserve now, pay when you stay
$64 nightly
The price is $71 total per night from Oct 11 to Oct 12
$71 total
Oct 11 - Oct 12
Total with taxes and fees
This motel doesn't skimp on freebies - guests receive free WiFi and free self parking. Laundry facilities are provided for your convenience.
8/10 Very Good! (703 reviews)
"This is a basic roadside style motel. There are no amenities to speak of. However, the room was clean and functional. The motel is also very convenient to the old part of Anacortes. It was good value for the price."

Reviewed on Oct 5, 2026

Opens in a new windowSan Juan Motel
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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

2 Star Hotels San Juan Island

Looking to break out of your routine for some much needed rest and relaxation? Or maybe you’ve already decided it’s time for a trip and are trying to find affordable hotels in San Juan Island that won’t bust your travel budget?

San Juan Island 2 star hotels will give you everything you need to enjoy the city like a local, saving a ton of money so you can hit all the hot spots in town.

Have a delicious breakfast at your hotel to fuel up for your day of sightseeing, then enjoy amenities like fresh towels and linens, as well as a nice hot shower to unwind after a busy day of experiencing everything the city has to offer.

As you explore a new locale, or one you love to visit over and over, you can rest easy knowing you’re staying in a great hotel that lets you discover San Juan Island and welcomes you back to a clean, comfortable room at night.

Browse Travelocity’s wide selection of 2 star hotels in San Juan Island and find one that’s perfectly priced and places you next to all the best activities and sights. The town is your oyster, and we can help you seek out its secrets while sticking to your budget.

Recent San Juan Island hotel reviews by fellow wanderers

Roche Harbor Resort

Roche Harbor Resort

4 out of 5
Posted 2 days ago
Travelocity Verified Review
"The town is adorable, like something out of a storybook, and the hotel is right at the core. It is all wonderfully decorated and maintained and an all around romantic place to spend a weekend. The only reason I did not give 5 stars was the bed. I am not sure if it was broken but it felt like it was leaning which made comfortable sleep a challenge."
A verified traveler stayed at Roche Harbor Resort
Roche Harbor Resort

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