Book Hotels in San Juan Island, WA

Start date: Check-in selected.
To Date
End date: Check-out

Cabins, apartments, houseboats! We offer comfortable & private vacation rentals

Save an extra 10% or more on select hotels with Member Discounts

Access exclusive hotel deals, only with the Travelocity app

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Neighborhood
Neighborhood
Traveler experience
Traveler experience
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility

Top San Juan Island hotels

Snug Harbor Resort

Snug Harbor Resort

2.5 out of 5
1997 Mitchell Bay Rd, Friday Harbor, WA
$234 nightly
The price is $259 total per night from Oct 27 to Oct 28
$259 total
Oct 27 - Oct 28
Total with taxes and fees
A marina, a 24-hour gym, and a restaurant are all featured at this smoke-free hotel. Enjoy the gym and perks like free self parking and free WiFi. A coffee shop, ...
"Everything was absolutely perfect and peaceful and very scenic thoroughly enjoyed our stay"

Reviewed on Sep 20, 2025

Opens in a new windowSnug Harbor Resort
Trumpeter Inn

Trumpeter Inn

3 out of 5
318 Trumpeter Way, Friday Harbor, WA
$160 nightly
The price is $176 total per night from Oct 1 to Oct 2
$176 total
Oct 1 - Oct 2
Total with taxes and fees
This bed & breakfast features free WiFi in public areas, concierge services, and free self parking. Enjoy the free full breakfast each morning. A garden, a library, ...
"Amazing stay. Would highly recommend."

Reviewed on Sep 19, 2025

Opens in a new windowTrumpeter Inn
Inn to the Woods B&B

Inn to the Woods B&B

3.5 out of 5
46 Elena Drive, Friday Harbor, WA
This bed & breakfast doesn't skimp on freebies - guests receive free breakfast, free WiFi, and free self parking. If you want to take your pet along, this pet-friendly ...
"I purchased this stay as a wedding gift for my nephew. He stayed there and loved it."

Reviewed on Aug 25, 2025

Opens in a new windowInn to the Woods B&B
Friday Harbor House

Friday Harbor House

3.5 out of 5
130 West Street, Friday Harbor, WA
$380 nightly
The price is $421 total per night from Oct 7 to Oct 8
$421 total
Oct 7 - Oct 8
Total with taxes and fees
A restaurant and a bar/lounge are featured at this hotel. Business travelers can take advantage of the free WiFi in public areas. Free self parking, a terrace, ...
Fancier Than Our Usual Places
"I think we booked a high end room as it was pricy but had a jetted tub, and fireplace in the room. The location was great as we could walk everywhere except the National Park."

Reviewed on Sep 18, 2025

Opens in a new windowFriday Harbor House
Tucker House Inn

Tucker House Inn

4 out of 5
275 C Street, Friday Harbor, WA
$192 nightly
The price is $213 total per night from Oct 13 to Oct 14
$213 total
Oct 13 - Oct 14
Total with taxes and fees
A full-service spa, a hot tub, and a restaurant are all featured at this smoke-free bed & breakfast. Traveling for business? Take advantage of the free WiFi ...
"Beautiful getway. Clean nice staff ,close to ferry harbor and walking distance town. You dont need a car to explore the beautiful town . Highly recommend"

Reviewed on Sep 5, 2025

Opens in a new windowTucker House Inn
Roche Harbor Resort

Roche Harbor Resort

3 out of 5
248 Reuben Memorial Dr, Friday Harbor, WA
$250 nightly
The price is $276 total per night from Oct 14 to Oct 15
$276 total
Oct 14 - Oct 15
Total with taxes and fees
A full-service spa, 3 restaurants, and an outdoor tennis court are all featured at this smoke-free resort. Enjoy the seasonal outdoor pool and perks like free ...
"We loved our stay. Adorable location."

Reviewed on Sep 18, 2025

Opens in a new windowRoche Harbor Resort
Earthbox Inn & Spa

Earthbox Inn & Spa

3 out of 5
410 Spring Street, Friday Harbor, WA
$225 nightly
The price is $249 total per night from Oct 2 to Oct 3
$249 total
Oct 2 - Oct 3
Total with taxes and fees
A full-service spa and an indoor pool are featured at this smoke-free hotel. Enjoy the gym and perks like free self parking and free WiFi. There's a hot tub ...
Quite, family-friendly home away from home.
"The hotel was in a very convenient location. Perfect for your fur babies to take on a walk. The room was clean and well equipped to host our 1 year old and 2 dogs. We had a lovely time. The hotel manager had excellent suggestions to explore on the island. Will definitely will stay with them next ..."

Reviewed on Sep 22, 2025

Opens in a new windowEarthbox Inn & Spa
Friday Harbor Suites

Friday Harbor Suites

2.5 out of 5
680 Spring Street, Friday Harbor, WA
Fully refundableReserve now, pay when you stay
$198 nightly
The price is $220 total per night from Oct 27 to Oct 28
$220 total
Oct 27 - Oct 28
Total with taxes and fees
A hot tub, free self parking, and concierge services are featured at this hotel. Guests will appreciate perks like free WiFi and a free ferry terminal shuttle. ...
"The suite was very nice and spacious. Much larger than I expected. I like the fact that there was a separate bedroom."

Reviewed on Sep 22, 2025

Opens in a new windowFriday Harbor Suites
The Orca Inn

The Orca Inn

2 out of 5
770 Mullis St., Friday Harbor, WA
$98 nightly
The price is $109 total per night from Oct 1 to Oct 2
$109 total
Oct 1 - Oct 2
Total with taxes and fees
This motel doesn't skimp on freebies - guests receive free WiFi and free self parking. A picnic area and barbecue grills are also provided.
"Love the location. Clean room and fridge and microwave in room. Dislike the small small room and set up. Odd set up, but we had what we needed."

Reviewed on Sep 21, 2025

Opens in a new windowThe Orca Inn
Don't see what you're looking for?
See all available properties in San Juan Island
View all properties
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Cheap San Juan Island hotels

The Orca Inn

The Orca Inn

770 Mullis St., Friday Harbor, WA
$98 nightly
The price is $109 total per night from Oct 1 to Oct 2
$109 total
Oct 1 - Oct 2
Total with taxes and fees
7.8/10 Good! (1,013 reviews)
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

San Juan Island Hotel & Travel Guide

Thinking about taking that trip to San Juan Islands? To experience it like the locals do, discover places to hang your hat that are near the hustle and bustle of San Juan Island. You will find 4 Travelocity-registered accommodation options located within 6-mile (10-kilometer) of the center of town.

Check out a choice of Travelocity places to stay located within a 6 miles (10 kilometers) distance, like the Earthbox Inn & Spa and Bird Rock Hotel.

The Amethyst Inn is 14 miles (23 kilometers) from the center of San Juan Island. Or, alternatively, the Prior Castle Inn is situated 14 miles (23 kilometers) away. More options worth looking into are the Fairholme Manor as well as the Comfy One Bedroom Suite in Oak Bay.

Friday Harbor Airport is the nearest preferred airport and is found 2 miles (3 kilometers) away from San Juan Island's downtown area. Conveniently located hotels include Earthbox Inn & Spa and Bird Rock Hotel.

Frequently asked questions

Where can I find cheap hotels in San Juan Island?
At Travelocity you'll find really nice hotels in San Juan Island at great prices. We source incredible prices with our trusted partners, so you have a tempting selection of cheap hotels to choose from. If you can be flexible on dates and location, consider staying at a hotel near San Juan Island rather than in San Juan Island. We may find you even better rates, too.
How do I find the best San Juan Island hotel deals?
Simple! On Travelocity, look through the fantastic offers we've already found in San Juan Island then use our filters to find a great deal that's perfect for you. Enter your travel dates, select the number of rooms you need, and we'll do the rest. You can get great discounts on flights and car hire, too, when you bundle.
How much does it cost to stay in a hotel in San Juan Island?
The cheapest hotel in San Juan Island is $109. This price was available within the past 7 days, for stays with a check-in date within the next year. Of course, the price you pay depends on your dates of travel, the length of your stay, and the hotel's location. Prices and availability are subject to change. Additional terms apply.
How many hotels are in San Juan Island?
There are 867 hotels in San Juan Island on Travelocity.
What are the best hotels in San Juan Island?
San Juan Island has so many great hotels to choose from at Travelocity — and it's so easy to find the perfect one. Just choose one of our popular pre-selected hotels with great reviews, or you can refine your search to build your ideal stay. Simply filter hotels based on price or star rating, or select properties with a pool, a hot tub, or a range of other amenities and pick the best place to stay in San Juan Island for you!
When is the best time to visit San Juan Island?
If you want the joy of a fun-filled trip in peak season, visit San Juan Island during March, April and May. If you'd prefer the peace of off-season, book a stay during quieter months, such as October, November and December.
When is the cheapest time to stay in San Juan Island?
Based on historic data is usually the cheapest month to visit San Juan Island. However, we have incredible deals all year round, so we're confident you'll find a room in your budget whenever you choose to travel.
Are there any great family-friendly hotels in San Juan Island?
There are multiple hotels in San Juan Island that will please the whole family. Do you need adjoining rooms, babysitting services or a swimming pool? We've got you covered. Use our family filter to narrow your search down and use guest reviews to help you pick the perfect place for your next family trip to San Juan Island. We have plenty of kid-friendly hotels in San Juan Island to choose from on Travelocity!
Why book a hotel in San Juan Island through Travelocity?
Because we have the top hotels in San Juan Island! We want to help you travel more and worry less. That's why we've put the most amazing hotel, car rental, and flight deals in one place. When you search for hotels with us, you know you're getting fantastic prices with no hidden fees and free cancellation on most properties up to 24 hours before your stay. If you become a Travelocity member, you also get exclusive member discounts. Sign up today!
How do I cancel my hotel booking in San Juan Island on Travelocity?
Canceling your booking with Travelocity is easy. Sign into your account and select My Trips. Here, you will see your cancellation options. We offer free cancellation on many properties.

Recent San Juan Island hotel reviews by fellow wanderers

Explore More Ways to Travel with Travelocity

Explore More Ways to Travel with Travelocity