Find and compare 3 Star hotels in San Juan Island

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Top San Juan Island 3 Star hotels

Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn

3 out of 5
5316 Ferry Terminal Road Anacortes WA
Fully refundableReserve now, pay when you stay
$89 nightly
The price is $99 total per night from Jan 18 to Jan 19
$99 total
Jan 18 - Jan 19
Total with taxes and fees
This hotel features a restaurant, a gym, and a bar/lounge. There's no skimping on freebies - guests receive free continental breakfast, free WiFi, and free self ...
9/10 Wonderful! (1,001 reviews)
Very nice and clean. Staff was helpful. Grounds were very nice too. A+

Reviewed on Jan 7, 2026

Opens in a new windowAnacortes Ship Harbor Inn
Outlook Inn

Outlook Inn

3 out of 5
171 Main St Eastsound WA
Fully refundableReserve now, pay when you stay
$232 nightly
The price is $256 total per night from Jan 14 to Jan 15
$256 total
Jan 14 - Jan 15
Total with taxes and fees
A restaurant and a bar/lounge are featured at this hotel. WiFi in public areas is free. A garden, a lobby fireplace, and a library are also on offer.
9/10 Wonderful! (504 reviews)
Communication was amazing, had the room ready for our late arrival, our little dog was so cute on the dog bed and all the cool snacks. It was a wonderful and lovely stay and I wish it wasn't a business trip. We would have stayed another evening.

Reviewed on Nov 16, 2025

Opens in a new windowOutlook Inn
Friday Harbor House

Friday Harbor House

3.5 out of 5
130 West Street Friday Harbor WA
$211 nightly
The price is $234 total per night from Jan 27 to Jan 28
$234 total
Jan 27 - Jan 28
Total with taxes and fees
A restaurant and a bar/lounge are featured at this hotel. Business travelers can take advantage of the free WiFi in public areas. Free self parking, a terrace, ...
9.4/10 Exceptional! (248 reviews)
Everything was great

Reviewed on Jan 7, 2026

Opens in a new windowFriday Harbor House
Lopez Islander Resort

Lopez Islander Resort

3.5 out of 5
2864 Fisherman Bay Rd Lopez Island WA
Fully refundableReserve now, pay when you stay
$159 nightly
The price is $175 total per night from Jan 15 to Jan 16
$175 total
Jan 15 - Jan 16
Total with taxes and fees
A marina and a restaurant are featured at this smoke-free hotel. Enjoy the seasonal outdoor pool and perks like free self parking and free WiFi. You'll appreciate ...
8.4/10 Very Good! (367 reviews)
Wonderful.

Reviewed on Dec 10, 2025

Opens in a new windowLopez Islander Resort
Landmark Inn on Orcas Island

Landmark Inn on Orcas Island

3 out of 5
67 Main St Eastsound WA
Fully refundableReserve now, pay when you stay
$219 nightly
The price is $242 total per night from Jan 18 to Jan 19
$242 total
Jan 18 - Jan 19
Total with taxes and fees
This hotel doesn't skimp on freebies - guests receive free WiFi and free self parking. A terrace, a garden, and express check-in are also on offer.
9.2/10 Wonderful! (189 reviews)
This place has amazing value. Where else can you get a three bedroom apartment for this rate, especially in such a prime location. The staff is always responsive and helpful, it made for a perfect stay.

Reviewed on Dec 30, 2025

Opens in a new windowLandmark Inn on Orcas Island
Earthbox Inn & Spa

Earthbox Inn & Spa

3 out of 5
410 Spring Street Friday Harbor WA
$210 nightly
The price is $232 total per night from Jan 14 to Jan 15
$232 total
Jan 14 - Jan 15
Total with taxes and fees
A full-service spa and an indoor pool are featured at this smoke-free hotel. Enjoy the gym and perks like free self parking and free WiFi. There's a hot tub ...
8.6/10 Excellent! (997 reviews)
Great place clean room. Nice people.

Reviewed on Dec 17, 2025

Opens in a new windowEarthbox Inn & Spa
Roche Harbor Resort

Roche Harbor Resort

3 out of 5
248 Reuben Memorial Dr Friday Harbor WA
$278 nightly
The price is $307 total per night from Jan 14 to Jan 15
$307 total
Jan 14 - Jan 15
Total with taxes and fees
A full-service spa, 3 restaurants, and an outdoor tennis court are all featured at this smoke-free resort. Enjoy the seasonal outdoor pool and perks like free ...
9.2/10 Wonderful! (417 reviews)
Loved everything this is a little piece of heaven!

Reviewed on Jan 6, 2026

Opens in a new windowRoche Harbor Resort
Deer Harbor Inn

Deer Harbor Inn

3 out of 5
33 Inn Lane Deer Harbor WA
$153 nightly
The price is $168 total per night from Jan 14 to Jan 15
$168 total
Jan 14 - Jan 15
Total with taxes and fees
A restaurant, free self parking, and a terrace are among this hotel's amenities. WiFi in public areas is free. A garden, a picnic area, and express check-out ...
8.4/10 Very Good! (199 reviews)
Quiet and relaxing.

Reviewed on Nov 13, 2025

Opens in a new windowDeer Harbor Inn
West Beach Resort

West Beach Resort

3.5 out of 5
190 Waterfront Way Eastsound WA
$186 nightly
The price is $205 total per night from Jan 14 to Jan 15
$205 total
Jan 14 - Jan 15
Total with taxes and fees
This smoke-free cabin's private beach and marina are among the highlights. Families will appreciate the playground and barbecue grills. Enjoy the hot tub and ...
9.2/10 Wonderful! (110 reviews)
Was wonderful

Reviewed on Dec 27, 2025

Opens in a new windowWest Beach Resort
Trumpeter Inn

Trumpeter Inn

3 out of 5
318 Trumpeter Way Friday Harbor WA
$174 nightly
The price is $193 total per night from Jan 18 to Jan 19
$193 total
Jan 18 - Jan 19
Total with taxes and fees
This bed & breakfast features free WiFi in public areas, concierge services, and free self parking. Enjoy the free full breakfast each morning. A garden, a library, ...
9.8/10 Exceptional! (247 reviews)
How lovely and personable everything was. The room was super nice and cozy. Loved the breakfast. It was so well made. And what a special experience to get to feed the alpacas and the goats!

Reviewed on Nov 17, 2025

Opens in a new windowTrumpeter Inn
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3 Star Hotels San Juan Island

Maybe you’ve got to travel for work, or perhaps you’re finally ready to book that much-deserved vacation—regardless, it’s time for you to get on a plane and you’re going to make the most of it. You’ve traveled enough to know how important a comfy bed and room service can be, so booking a hotel with all the amenities you need is a priority.

You can find 3 star hotels in San Juan Island that keep you close to all the great sightseeing and activities around the area, or even book a place that’s a bit more secluded, if that’s what you prefer. No matter what you’re looking for—whether you’re all about the location or are invested in on-site perks--Travelocity will help you find the accommodation that works best for you.

When it comes to options, you’ll have them. The San Juan Island 3 star hotels give you plenty of choices as far as access to the best areas, and many also offer a breakfast buffet, as well as plenty of other amenities like high-speed Wi-Fi and an on-site pool or spa.

Whatever you’re looking for on your next getaway, browse Travelocity’s big selection of hotels to ensure you get the best possible deal. Book one of the best 3 star hotels in San Juan Island today!

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