Find and compare 3 Star hotels in San Juan Island

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Top San Juan Island 3 Star hotels

Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn

3 out of 5
5316 Ferry Terminal Road, Anacortes, WA
Fully refundableReserve now, pay when you stay
$104 nightly
The price is $115 total per night from Oct 5 to Oct 6
$115 total
Oct 5 - Oct 6
Total with taxes and fees
This hotel features a restaurant, a gym, and a bar/lounge. There's no skimping on freebies - guests receive free continental breakfast, free WiFi, and free self ...
8.8/10 Excellent! (1,018 reviews)
"Quaint with a beautiful view."

Reviewed on Sep 22, 2025

Opens in a new windowAnacortes Ship Harbor Inn
Earthbox Inn & Spa

Earthbox Inn & Spa

3 out of 5
410 Spring Street, Friday Harbor, WA
$225 nightly
The price is $249 total per night from Oct 2 to Oct 3
$249 total
Oct 2 - Oct 3
Total with taxes and fees
A full-service spa and an indoor pool are featured at this smoke-free hotel. Enjoy the gym and perks like free self parking and free WiFi. There's a hot tub ...
8.6/10 Excellent! (983 reviews)
Quite, family-friendly home away from home.
"The hotel was in a very convenient location. Perfect for your fur babies to take on a walk. The room was clean and well equipped to host our 1 year old and 2 dogs. We had a lovely time. The hotel manager had excellent suggestions to explore on the island. Will definitely will stay with them next ..."

Reviewed on Sep 22, 2025

Opens in a new windowEarthbox Inn & Spa
Lopez Islander Resort

Lopez Islander Resort

3.5 out of 5
2864 Fisherman Bay Rd, Lopez Island, WA
Fully refundableReserve now, pay when you stay
$159 nightly
The price is $175 total per night from Oct 1 to Oct 2
$175 total
Oct 1 - Oct 2
Total with taxes and fees
A marina and a restaurant are featured at this smoke-free hotel. Enjoy the seasonal outdoor pool and perks like free self parking and free WiFi. You'll appreciate ...
8.4/10 Very Good! (346 reviews)
"This location was PERFECT for our bike riding group - we made it our home base for a week of riding several islands. Easy 4-5 miles to the ferry. Safe parking for our vehicles and bikes when not in use. Good food and great service at the restaurant. Front desk assistance was spectacular, and they ..."

Reviewed on Sep 8, 2025

Opens in a new windowLopez Islander Resort
Outlook Inn

Outlook Inn

3 out of 5
171 Main St, Eastsound, WA
Fully refundableReserve now, pay when you stay
$282 nightly
The price is $311 total per night from Oct 5 to Oct 6
$311 total
Oct 5 - Oct 6
Total with taxes and fees
A restaurant and a bar/lounge are featured at this hotel. WiFi in public areas is free. A garden, a lobby fireplace, and a library are also on offer.
9/10 Wonderful! (495 reviews)
"Very helpful staff and stunning view from the bay view suites. Restaurant on property was only average but there are multiple other places to eat within easy walking distance."

Reviewed on Sep 25, 2025

Opens in a new windowOutlook Inn
Landmark Inn on Orcas Island

Landmark Inn on Orcas Island

3 out of 5
67 Main St, Eastsound, WA
Fully refundableReserve now, pay when you stay
$239 nightly
The price is $264 total per night from Oct 1 to Oct 2
$264 total
Oct 1 - Oct 2
Total with taxes and fees
This hotel doesn't skimp on freebies - guests receive free WiFi and free self parking. A terrace, a garden, and express check-in are also on offer.
9.2/10 Wonderful! (177 reviews)
"Excellent condo with a great view and everything needed for a great vacation."

Reviewed on Sep 9, 2025

Opens in a new windowLandmark Inn on Orcas Island
Roche Harbor Resort

Roche Harbor Resort

3 out of 5
248 Reuben Memorial Dr, Friday Harbor, WA
$250 nightly
The price is $276 total per night from Oct 14 to Oct 15
$276 total
Oct 14 - Oct 15
Total with taxes and fees
A full-service spa, 3 restaurants, and an outdoor tennis court are all featured at this smoke-free resort. Enjoy the seasonal outdoor pool and perks like free ...
9/10 Wonderful! (397 reviews)
"We loved our stay. Adorable location."

Reviewed on Sep 18, 2025

Opens in a new windowRoche Harbor Resort
Deer Harbor Inn

Deer Harbor Inn

3 out of 5
33 Inn Lane, Deer Harbor, WA
$183 nightly
The price is $202 total per night from Oct 1 to Oct 2
$202 total
Oct 1 - Oct 2
Total with taxes and fees
A restaurant, free self parking, and a terrace are among this hotel's amenities. WiFi in public areas is free. A garden, a picnic area, and express check-out ...
8.2/10 Very Good! (190 reviews)
"Stayed at a lodge room overnight. Excellent value for money. Our room and bathroom were clean. Check in was very easy. The bed was very comfortable; it was so comfy that it heavily influenced our decision to sleep in rather than get back on the road early morning. I would definitely stay again!"

Reviewed on Sep 7, 2025

Opens in a new windowDeer Harbor Inn
Friday Harbor House

Friday Harbor House

3.5 out of 5
130 West Street, Friday Harbor, WA
$380 nightly
The price is $421 total per night from Oct 7 to Oct 8
$421 total
Oct 7 - Oct 8
Total with taxes and fees
A restaurant and a bar/lounge are featured at this hotel. Business travelers can take advantage of the free WiFi in public areas. Free self parking, a terrace, ...
9.4/10 Exceptional! (228 reviews)
Fancier Than Our Usual Places
"I think we booked a high end room as it was pricy but had a jetted tub, and fireplace in the room. The location was great as we could walk everywhere except the National Park."

Reviewed on Sep 18, 2025

Opens in a new windowFriday Harbor House
Nantucket Inn

Nantucket Inn

3.5 out of 5
3402 Commercial Ave, Anacortes, WA
$169 nightly
The price is $187 total per night from Sep 30 to Oct 1
$187 total
Sep 30 - Oct 1
Total with taxes and fees
This bed & breakfast features free WiFi in public areas, barbecue grills, and free self parking. Enjoy the free full breakfast each morning. A garden, a lobby ...
9.8/10 Exceptional! (485 reviews)
"what a lovely place to end our PNW vacation!! The Inn is beautiful and Jessica and her staff are a breath of fresh air. Literally, our only half way complaint was that our room was very warm and had to sleep with the windows open to cool it down, which did make for a louder experience from cars passing ..."

Reviewed on Sep 22, 2025

Opens in a new windowNantucket Inn
Trumpeter Inn

Trumpeter Inn

3 out of 5
318 Trumpeter Way, Friday Harbor, WA
$160 nightly
The price is $176 total per night from Oct 1 to Oct 2
$176 total
Oct 1 - Oct 2
Total with taxes and fees
This bed & breakfast features free WiFi in public areas, concierge services, and free self parking. Enjoy the free full breakfast each morning. A garden, a library, ...
9.8/10 Exceptional! (238 reviews)
"Amazing stay. Would highly recommend."

Reviewed on Sep 19, 2025

Opens in a new windowTrumpeter Inn
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3 Star Hotels San Juan Island

Maybe you’ve got to travel for work, or perhaps you’re finally ready to book that much-deserved vacation—regardless, it’s time for you to get on a plane and you’re going to make the most of it. You’ve traveled enough to know how important a comfy bed and room service can be, so booking a hotel with all the amenities you need is a priority.

You can find 3 star hotels in San Juan Island that keep you close to all the great sightseeing and activities around the area, or even book a place that’s a bit more secluded, if that’s what you prefer. No matter what you’re looking for—whether you’re all about the location or are invested in on-site perks--Travelocity will help you find the accommodation that works best for you.

When it comes to options, you’ll have them. The San Juan Island 3 star hotels give you plenty of choices as far as access to the best areas, and many also offer a breakfast buffet, as well as plenty of other amenities like high-speed Wi-Fi and an on-site pool or spa.

Whatever you’re looking for on your next getaway, browse Travelocity’s big selection of hotels to ensure you get the best possible deal. Book one of the best 3 star hotels in San Juan Island today!

Recent San Juan Island hotel reviews by fellow wanderers