Book Hotels in San Juan Island, WA

Cabins, apartments, houseboats! We offer comfortable & private vacation rentals

Save an extra 10% or more on select hotels with Member Discounts

Access exclusive hotel deals, only with the Travelocity app

Check prices for these dates

Filter by

Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Neighborhood
Neighborhood
Traveler experience
Traveler experience
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility

Top San Juan Island hotels

Snug Harbor Resort

Snug Harbor Resort

2.5 out of 5
1997 Mitchell Bay Rd, Friday Harbor, WA
A marina, a 24-hour gym, and a restaurant are all featured at this smoke-free hotel. Enjoy the gym and perks like free self parking and free WiFi. A coffee shop, ...
"This was a beautiful location. It was quiet and relaxing yet not far from the bustling Roche and Friday Harbors."

Reviewed on Aug 18, 2025

Snug Harbor Resort
Trumpeter Inn

Trumpeter Inn

3 out of 5
318 Trumpeter Way, Friday Harbor, WA
$263 nightly
The price is $290 total per night from Sep 15 to Sep 16
$290 total
Sep 15 - Sep 16
Total with taxes and fees
This bed & breakfast features free WiFi in public areas, concierge services, and free self parking. Enjoy the free full breakfast each morning. A garden, a library, ...
"The property is stunning, and the hosts were exceptional. We thoroughly enjoyed exploring the farm, and the breakfast was especially delightful."

Reviewed on Aug 6, 2025

Trumpeter Inn
Inn to the Woods B&B

Inn to the Woods B&B

3.5 out of 5
46 Elena Drive, Friday Harbor, WA
This bed & breakfast doesn't skimp on freebies - guests receive free breakfast, free WiFi, and free self parking. If you want to take your pet along, this pet-friendly ...
"Very kind staff. Our trip was for our honeymoon, so the staff decorated our room with rose petals, and they gave us complimentary mimosas and a bottle of wine. Quick access to Friday and Roche Harbor."

Reviewed on Jul 23, 2025

Inn to the Woods B&B
Friday Harbor House

Friday Harbor House

3.5 out of 5
130 West Street, Friday Harbor, WA
$445 nightly
The price is $493 total per night from Sep 16 to Sep 17
$493 total
Sep 16 - Sep 17
Total with taxes and fees
A restaurant and a bar/lounge are featured at this hotel. Business travelers can take advantage of the free WiFi in public areas. Free self parking, a terrace, ...
"What a freakin view!!!!"

Reviewed on Jul 28, 2025

Friday Harbor House
Roche Harbor Resort

Roche Harbor Resort

3 out of 5
248 Reuben Memorial Dr, Friday Harbor, WA
$295 nightly
The price is $325 total per night from Sep 16 to Sep 17
$325 total
Sep 16 - Sep 17
Total with taxes and fees
A full-service spa, 3 restaurants, and an outdoor tennis court are all featured at this smoke-free resort. Enjoy the seasonal outdoor pool and perks like free ...
"Fantastic stay!"

Reviewed on Jul 14, 2025

Roche Harbor Resort
Earthbox Inn & Spa

Earthbox Inn & Spa

3 out of 5
410 Spring Street, Friday Harbor, WA
$255 nightly
The price is $282 total per night from Sep 1 to Sep 2
$282 total
Sep 1 - Sep 2
Total with taxes and fees
A full-service spa and an indoor pool are featured at this smoke-free hotel. Enjoy the gym and perks like free self parking and free WiFi. There's a hot tub ...
"The only thing we didn’t like, we found ants on the countertop."

Reviewed on Aug 18, 2025

Earthbox Inn & Spa
Bird Rock Hotel

Bird Rock Hotel

2 out of 5
35 First Street, Friday Harbor, WA
$224 nightly
The price is $248 total per night from Sep 1 to Sep 2
$248 total
Sep 1 - Sep 2
Total with taxes and fees
Free WiFi in public areas, a terrace, and a garden are available at this hotel. A picnic area, express check-in, and express check-out are also on offer.
Weekend getaway!
"Great location for walking around town. Loved Friday Harbor."

Reviewed on Jul 19, 2025

Bird Rock Hotel
Friday Harbor Suites

Friday Harbor Suites

2.5 out of 5
680 Spring Street, Friday Harbor, WA
Fully refundableReserve now, pay when you stay
$200 nightly
The price is $222 total per night from Sep 21 to Sep 22
$222 total
Sep 21 - Sep 22
Total with taxes and fees
A hot tub, free self parking, and concierge services are featured at this hotel. Guests will appreciate perks like free WiFi and a free ferry terminal shuttle. ...
"Friendly, helpful staff. Great location. Safe. Walkable to local restaurants, ferry, stores. Dated decor. Difficult to figure out air conditioner remote control. Floors could use a deep cleaning."

Reviewed on Aug 14, 2025

Friday Harbor Suites
The Orca Inn

The Orca Inn

2 out of 5
770 Mullis St., Friday Harbor, WA
$141 nightly
The price is $157 total per night from Sep 19 to Sep 20
$157 total
Sep 19 - Sep 20
Total with taxes and fees
This motel doesn't skimp on freebies - guests receive free WiFi and free self parking. A picnic area and barbecue grills are also provided.
"I liked that it was affordable and close to a variety of food options, shopping, and excursions."

Reviewed on Aug 12, 2025

The Orca Inn
Don't see what you're looking for?
See all available properties in San Juan Island
View all properties
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Cheap San Juan Island hotels

The Orca Inn

The Orca Inn

770 Mullis St., Friday Harbor, WA
$141 nightly
The price is $157 total per night from Sep 19 to Sep 20
$157 total
Sep 19 - Sep 20
Total with taxes and fees
7.8/10 Good! (1,002 reviews)
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

San Juan Island Hotel & Travel Guide

Thinking about taking that trip to San Juan Islands? To experience it like the locals do, discover places to hang your hat that are near the hustle and bustle of San Juan Island. You will find 4 Travelocity-registered accommodation options located within 6-mile (10-kilometer) of the center of town.

Check out a choice of Travelocity places to stay located within a 6 miles (10 kilometers) distance, like the Earthbox Inn & Spa and Bird Rock Hotel.

The Amethyst Inn is 14 miles (23 kilometers) from the center of San Juan Island. Or, alternatively, the Prior Castle Inn is situated 14 miles (23 kilometers) away. More options worth looking into are the Fairholme Manor as well as the Comfy One Bedroom Suite in Oak Bay.

Friday Harbor Airport is the nearest preferred airport and is found 2 miles (3 kilometers) away from San Juan Island's downtown area. Conveniently located hotels include Earthbox Inn & Spa and Bird Rock Hotel.

Frequently asked questions

Where can I find cheap hotels in San Juan Island?
At Travelocity you'll find really nice hotels in San Juan Island at great prices. We source incredible prices with our trusted partners, so you have a tempting selection of cheap hotels to choose from. If you can be flexible on dates and location, consider staying at a hotel near San Juan Island rather than in San Juan Island. We may find you even better rates, too.
How do I find the best San Juan Island hotel deals?
Simple! On Travelocity, look through the fantastic offers we've already found in San Juan Island then use our filters to find a great deal that's perfect for you. Enter your travel dates, select the number of rooms you need, and we'll do the rest. You can get great discounts on flights and car hire, too, when you bundle.
How much does it cost to stay in a hotel in San Juan Island?
The cheapest hotel in San Juan Island is $157. This price was available within the past 7 days, for stays with a check-in date within the next year. Of course, the price you pay depends on your dates of travel, the length of your stay, and the hotel's location. Prices and availability are subject to change. Additional terms apply.
How many hotels are in San Juan Island?
There are 846 hotels in San Juan Island on Travelocity.
What are the best hotels in San Juan Island?
San Juan Island has so many great hotels to choose from at Travelocity — and it's so easy to find the perfect one. Just choose one of our popular pre-selected hotels with great reviews, or you can refine your search to build your ideal stay. Simply filter hotels based on price or star rating, or select properties with a pool, a hot tub, or a range of other amenities and pick the best place to stay in San Juan Island for you!
When is the best time to visit San Juan Island?
If you want the joy of a fun-filled trip in peak season, visit San Juan Island during March, April and May. If you'd prefer the peace of off-season, book a stay during quieter months, such as October, November and December.
When is the cheapest time to stay in San Juan Island?
Based on historic data is usually the cheapest month to visit San Juan Island. However, we have incredible deals all year round, so we're confident you'll find a room in your budget whenever you choose to travel.
Are there any great family-friendly hotels in San Juan Island?
There are multiple hotels in San Juan Island that will please the whole family. Do you need adjoining rooms, babysitting services or a swimming pool? We've got you covered. Use our family filter to narrow your search down and use guest reviews to help you pick the perfect place for your next family trip to San Juan Island. We have plenty of kid-friendly hotels in San Juan Island to choose from on Travelocity!
Why book a hotel in San Juan Island through Travelocity?
Because we have the top hotels in San Juan Island! We want to help you travel more and worry less. That's why we've put the most amazing hotel, car rental, and flight deals in one place. When you search for hotels with us, you know you're getting fantastic prices with no hidden fees and free cancellation on most properties up to 24 hours before your stay. If you become a Travelocity member, you also get exclusive member discounts. Sign up today!
How do I cancel my hotel booking in San Juan Island on Travelocity?
Canceling your booking with Travelocity is easy. Sign into your account and select My Trips. Here, you will see your cancellation options. We offer free cancellation on many properties.

Recent San Juan Island hotel reviews by fellow wanderers

Explore More Ways to Travel with Travelocity

Explore More Ways to Travel with Travelocity