Find and compare 3 Star hotels in Marathon

Seize Your Someday with our amazing deals for the whole family!

Save an extra 10% or more on select hotels with Member Discounts

Access exclusive hotel deals, only with the Travelocity app

Check prices for these dates

This weekend
Next weekend

Top Marathon 3 Star hotels

Captain Pips Marina & Hideaway

Captain Pips Marina & Hideaway

3 out of 5
1480 Overseas Hwy Marathon FL
$179 nightly
The price is $202 total per night from Mar 1 to Mar 2
$202 total
Mar 1 - Mar 2
Total with taxes and fees
A marina and an outdoor pool are featured at this hotel. Enjoy a meal from the restaurant and perks like free WiFi. There's a bar/lounge on site, and a garden ...
9/10 Wonderful! (1,027 reviews)
All of that + great location for phishing

Reviewed on Feb 23, 2026

Opens in a new windowCaptain Pips Marina & Hideaway
Courtyard by Marriott Faro Blanco Resort

Courtyard by Marriott Faro Blanco Resort

3 out of 5
2146 Overseas Hwy Marathon FL
Fully refundableReserve now, pay when you stay
$410 nightly
The price is $461 total per night from Mar 10 to Mar 11
$461 total
Mar 10 - Mar 11
Total with taxes and fees
This smoke-free hotel features 2 outdoor pools, a 24-hour gym, and a restaurant. Traveling on business? Take advantage of the business center and free WiFi in ...
9/10 Wonderful! (1,000 reviews)
The location is excellent — right on the ocean with beautiful water views. The waterfront setting is definitely the highlight of the property. The on-site restaurant overlooking the water was very nice and made for an enjoyable dining experience. All of the staff members we encountered were friendly ...

Reviewed on Feb 21, 2026

Opens in a new windowCourtyard by Marriott Faro Blanco Resort
Banana Bay Resort & Marina

Banana Bay Resort & Marina

3 out of 5
4590 Overseas Highway Marathon FL
$286 nightly
The price is $322 total per night from Mar 22 to Mar 23
$322 total
Mar 22 - Mar 23
Total with taxes and fees
2 outdoor tennis courts, an outdoor pool, and a hot tub are all featured at this smoke-free hotel. Relax with a drink at the bar/lounge and enjoy the free continental ...
7.6/10 Good! (1,015 reviews)
we enjoyed our stay. Good location. It would be great if the was an ice machine in every building.

Reviewed on Feb 22, 2026

Opens in a new windowBanana Bay Resort & Marina
Skipjack Resort & Marina

Skipjack Resort & Marina

3 out of 5
19 Sombrero Blvd Marathon FL
Fully refundableReserve now, pay when you stay
$366 nightly
The price is $412 total per night from Mar 25 to Mar 26
$412 total
Mar 25 - Mar 26
Total with taxes and fees
A marina and an outdoor pool are featured at this aparthotel. Business travelers can take advantage of the business center. Enjoy the gym and perks like free ...
8.6/10 Excellent! (1,230 reviews)
We stayed in one of the suites which was gorgeous! So clean, modern, and had everything we needed. The little touches, like sewing kit, toothbrush, etc were much appreciated. We loved walking out of our patio door every morning and going for a little walk to look at all the boats. All the satff were ...

Reviewed on Feb 21, 2026

Opens in a new windowSkipjack Resort & Marina
Yacht Haven Marina

Yacht Haven Marina

3.5 out of 5
5 Sombrero Blvd Marathon FL
$394 nightly
The price is $443 total per night from Mar 2 to Mar 3
$443 total
Mar 2 - Mar 3
Total with taxes and fees
This houseboat doesn't skimp on freebies - guests receive free WiFi and free self parking. A picnic area and barbecue grills are also provided.
9.8/10 Exceptional! (273 reviews)
We really enjoyed our stay. It was something a little different, would have been a nice place to stay longer than 1 night. It slept 6 comfortably but only had the 1 twin bed in the loft where it could have fit 2 which would made it easier. The couch made a nice bed also but would not have had to ...

Reviewed on Feb 22, 2026

Opens in a new windowYacht Haven Marina
Tropical Cottages

Tropical Cottages

3 out of 5
243 61st Street Gulf Marathon FL
$230 nightly
The price is $259 total per night from Mar 1 to Mar 2
$259 total
Mar 1 - Mar 2
Total with taxes and fees
A restaurant and a bar/lounge are featured at this cottage. Free self parking, a garden, and a snack bar/deli are also offered.
8.6/10 Excellent! (935 reviews)
A cute and adequate space. Not luxurious however. Good digs for an overnight stay in Marathon. Clean and basic.

Reviewed on Feb 22, 2026

Opens in a new windowTropical Cottages
Cabins at Bonefish Bay

Cabins at Bonefish Bay

3 out of 5
12565 Overseas Hwy Marathon FL
An outdoor pool, free self parking, and laundry facilities are featured at this cabin. WiFi in public areas is free. A picnic area and barbecue grills are also ...
9.4/10 Exceptional! (105 reviews)
The pictures showed a houseboat on the water. What I got was a cabin looking at the water. Although the cabin was pleasant, it was not what I was expecting. The shower was terrible. It was like standing in a slow drizzle. The TV reception seemed to be mostly subscription based and it was difficult ...

Reviewed on Feb 23, 2026

Opens in a new windowCabins at Bonefish Bay
Seascape Resort & Marina

Seascape Resort & Marina

3 out of 5
1275 76th Oceanside Marathon FL
$467 nightly
The price is $525 total per night from Mar 18 to Mar 19
$525 total
Mar 18 - Mar 19
Total with taxes and fees
This smoke-free motel's private beach and marina are among the highlights. Enjoy a day at the beach kayaking, or relax with sun loungers. Enjoy the outdoor pool ...
9.4/10 Exceptional! (574 reviews)
Whole experience was excellent. Staff & checkin brilliant. Room was spacious, spotless and included the necessary equipment for meals. Outside was a fantastic patio area, BBQ, Gas Fire Pit & loungers. The swimming pool was a great size with plenty loungers and chairs. The private beach area was exclusive, ...

Reviewed on Feb 23, 2026

Opens in a new windowSeascape Resort & Marina
Aqua Lodge Rentals At Coconut Cay

Aqua Lodge Rentals At Coconut Cay

3.5 out of 5
7200 Aviation Blvd Marathon FL
$421 nightly
The price is $474 total per night from Mar 10 to Mar 11
$474 total
Mar 10 - Mar 11
Total with taxes and fees
This houseboat doesn't skimp on freebies - guests receive free WiFi and free self parking. If you want to take your pet along, this pet-friendly property offers ...
9.6/10 Exceptional! (209 reviews)
Staff was wonderful & the houseboat was very cool to stay in, very clean & well supplied.

Reviewed on Feb 19, 2026

Opens in a new windowAqua Lodge Rentals At Coconut Cay
Knight's Key Suites

Knight's Key Suites

3 out of 5
40 Kyle Way W Marathon FL
$222 nightly
The price is $247 total per night from Mar 2 to Mar 3
$247 total
Mar 2 - Mar 3
Total with taxes and fees
An outdoor pool, free self parking, and barbecue grills are featured at this aparthotel. WiFi in public areas is free. A picnic area and a virtual front desk ...
9/10 Wonderful! (1,174 reviews)
Very clean and good location to seven mile bridge entrance.

Reviewed on Feb 19, 2026

Opens in a new windowKnight's Key Suites
Don't see what you're looking for?
See all available properties in Marathon
View all properties
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

3 Star Hotels Marathon

Maybe you’ve got to travel for work, or perhaps you’re finally ready to book that much-deserved vacation—regardless, it’s time for you to get on a plane and you’re going to make the most of it. You’ve traveled enough to know how important a comfy bed and room service can be, so booking a hotel with all the amenities you need is a priority.

You can find 3 star hotels in Marathon that keep you close to all the great sightseeing and activities around the area, or even book a place that’s a bit more secluded, if that’s what you prefer. No matter what you’re looking for—whether you’re all about the location or are invested in on-site perks--Travelocity will help you find the accommodation that works best for you.

When it comes to options, you’ll have them. The Marathon 3 star hotels give you plenty of choices as far as access to the best areas, and many also offer a breakfast buffet, as well as plenty of other amenities like high-speed Wi-Fi and an on-site pool or spa.

Whatever you’re looking for on your next getaway, browse Travelocity’s big selection of hotels to ensure you get the best possible deal. Book one of the best 3 star hotels in Marathon today!

Recent Marathon hotel reviews by fellow wanderers