Cheap Flights to Nagasaki Prefecture from $45 (2025/2026)

Wander Wisely with exceptional service, 24/7 supportOpens in a new window

Feel at ease with free flight cancellations within 24 hours of booking

Change your flight without a fee on select flights

Jet to one of Nagasaki Prefecture's top cities

Sasebo

Flights
Sasebo

Goto

Flights
Goto

How Much Does it Cost To Fly To Nagasaki Prefecture?

Prices found within past 7 days. Prices and availability subject to change. Additional terms may apply.

Tue, May 27 - Wed, Jun 18
ICN
Incheon Intl.
FUK
Fukuoka
$81 Roundtrip, found 1 day ago
$81
Roundtrip
found 1 day ago
Select T'Way Air flight, departing Tue, May 27 from Incheon Intl. to Fukuoka, returning Wed, Jun 18, priced at $81 found 1 day ago
Mon, Sep 8 - Thu, Sep 11
ICN
Incheon Intl.
NGS
Nagasaki
$134 Roundtrip, found 3 days ago
$134
Roundtrip
found 3 days ago
Select Korean Air flight, departing Mon, Sep 8 from Incheon Intl. to Nagasaki, returning Thu, Sep 11, priced at $134 found 3 days ago
Tue, Jul 29 - Tue, Aug 5
ICN
Incheon Intl.
KMJ
Kumamoto
$157 Roundtrip, found 3 days ago
$157
Roundtrip
found 3 days ago
Select Korean Air flight, departing Tue, Jul 29 from Incheon Intl. to Kumamoto, returning Tue, Aug 5, priced at $157 found 3 days ago
Mon, May 19 - Thu, May 22
ICN
Incheon Intl.
FUK
Fukuoka
$158 Roundtrip, just found
$158
Roundtrip
just found
Select Jeju Air flight, departing Mon, May 19 from Incheon Intl. to Fukuoka, returning Thu, May 22, priced at $158 just found
Sun, May 18 - Thu, May 22
ICN
Incheon Intl.
FUK
Fukuoka
$174 Roundtrip, found 19 hours ago
$174
Roundtrip
found 19 hours ago
Select Asiana Airlines flight, departing Sun, May 18 from Incheon Intl. to Fukuoka, returning Thu, May 22, priced at $174 found 19 hours ago
Mon, May 19 - Thu, May 22
ICN
Incheon Intl.
FUK
Fukuoka
$183 Roundtrip, just found
$183
Roundtrip
just found
Select Hahn Air Systems flight, departing Mon, May 19 from Incheon Intl. to Fukuoka, returning Thu, May 22, priced at $183 just found
Mon, Dec 1 - Tue, Dec 2
HND
Haneda
FUK
Fukuoka
$211 Roundtrip, found 8 hours ago
$211
Roundtrip
found 8 hours ago
Select All Nippon Airways flight, departing Mon, Dec 1 from Haneda to Fukuoka, returning Tue, Dec 2, priced at $211 found 8 hours ago
Thu, Sep 25 - Sun, Sep 28
HND
Haneda
HSG
Ariake Saga
$211 Roundtrip, found 5 days ago
$211
Roundtrip
found 5 days ago
Select All Nippon Airways flight, departing Thu, Sep 25 from Haneda to Ariake Saga, returning Sun, Sep 28, priced at $211 found 5 days ago
Thu, May 8 - Mon, May 12
HNL
Daniel K. Inouye Intl.
NGS
Nagasaki
$610 Roundtrip, found 1 day ago
$610
Roundtrip
found 1 day ago
Select All Nippon Airways flight, departing Thu, May 8 from Daniel K. Inouye Intl. to Nagasaki, returning Mon, May 12, priced at $610 found 1 day ago
Wed, Jun 11 - Wed, Jun 18
HNL
Daniel K. Inouye Intl.
FUK
Fukuoka
$611 Roundtrip, just found
$611
Roundtrip
just found
Select Korean Air flight, departing Wed, Jun 11 from Daniel K. Inouye Intl. to Fukuoka, returning Wed, Jun 18, priced at $611 just found
Sat, Dec 6 - Wed, Dec 17
HNL
Daniel K. Inouye Intl.
KMJ
Kumamoto
$614 Roundtrip, found 14 hours ago
$614
Roundtrip
found 14 hours ago
Select All Nippon Airways flight, departing Sat, Dec 6 from Daniel K. Inouye Intl. to Kumamoto, returning Wed, Dec 17, priced at $614 found 14 hours ago
OriginDestinationTravel DatesFlights From*
NRTFukuokaMay 29 to May 31$111
ITMFukuokaAugust 6 to August 7$143
ITMFukuokaAugust 6 to August 7$143
ITMMashikiJuly 31 to August 2$148
ITMMashikiJuly 31 to August 2$148
ITMOmuraJuly 24 to July 24$175
NGOFukuokaJuly 7 to July 14$202
HNDFukuokaAugust 5 to August 7$211
NRTOmuraMay 20 to May 22$231
NGOOmuraJune 18 to June 19$235
HNDSagaJune 15 to July 6$246
TPEMashikiJune 16 to June 20$358
TSAOmuraJuly 19 to July 21$577
LGWFukuokaMay 29 to June 4$687
FCOFukuokaAugust 11 to August 24$1,267
*Prices include taxes and fees
OriginDestinationTravel DatesFlights From*
HKGFukuokaMay 9 to May 15$242
TPEFukuokaMay 11 to May 13$407
HNDFukuokaMay 11 to May 15$409
HNDOmuraMay 10 to May 12$458
HNDOmuraMay 10 to May 12$458
*Prices include taxes and fees

Best Nagasaki Prefecture Flight and Hotel Packages

Price found within the past 48 hours. Click for updated prices.
GRAND BASE Nagasaki Nakamachi
3.0-star property

GRAND BASE Nagasaki Nakamachi

Jun 10 - Jun 13

3 night stay

Seoul (SEL) to Nagasaki (NGS)

Japan Airlines • Non-stop roundtrip • Coach
per person
found 11 hours ago
Shisekiryokan Kagetsu Taisyokan
3.0-star property

Shisekiryokan Kagetsu Taisyokan

Jun 10 - Jun 13

3 night stay

Seoul (SEL) to Nagasaki (NGS)

Jeju Air • Roundtrip • Coach
Save 100% on your flight
per person
found 11 hours ago
ROYAL CHESTER NAGASAKI hotel & retreat
3.5-star property

ROYAL CHESTER NAGASAKI hotel & retreat

Jun 10 - Jun 13

3 night stay

Seoul (SEL) to Nagasaki (NGS)

Japan Airlines • Non-stop roundtrip • Coach
per person
found 11 hours ago
Don't see what you're looking for?
See all available trips from Seoul to Nagasaki Prefecture
View all trips

Travelers ❤️ These Nagasaki Prefecture 🏨

Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch

3.5 out of 5
6 Huis Ten Bosch, Sasebo, Nagasaki-ken
Stay at this 3.5-star hotel in Sasebo. Enjoy free WiFi, 2 restaurants, and breakfast (surcharge). Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Huis Ten Bosch and Mukyudo are located nearby.
8.8/10 Excellent! (1,587 reviews)
"Breakfast buffet had so many choices. Onsen spa was well equipped. I had the place to all by myself at 4 PM."

Reviewed on Jan 17, 2025

Hotel Nikko Huis Ten Bosch
Belleview Nagasaki Dejima

Belleview Nagasaki Dejima

3 out of 5
1-20 Edo-machi, Nagasaki, Nagasaki
Stay at this 3-star hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and parking (surcharge). Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Yume Saito Shopping Mall and Nagasaki Dejima are located nearby.
8.6/10 Excellent! (879 reviews)
"Great comfort, and amazing access to the wharf and to Dejima Island."

Reviewed on Apr 24, 2025

Belleview Nagasaki Dejima
Hotel Okura JR Huis Ten Bosch

Hotel Okura JR Huis Ten Bosch

4 out of 5
10 Huis Ten Bosch cho, Sasebo, Nagasaki
Stay at this 4-star hotel in Sasebo. Enjoy free WiFi, 4 restaurants, and hot springs on site. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Huis Ten Bosch and Mukyudo are located nearby.
9.2/10 Wonderful! (1,003 reviews)
"The room was clean with a great view. It was worth paying a little more with park view."

Reviewed on Apr 25, 2025

Hotel Okura JR Huis Ten Bosch
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free
Cuore Nagasaki EkiMae

Cuore Nagasaki EkiMae

3 out of 5
7-3 Daikokumachi, Nagasaki, Nagasaki, Kyushu Island
Stay at this 3-star business-friendly hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and in-room massages. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Amu Plaza Nagasaki and Fukusaiji Temple are located nearby.
8.6/10 Excellent! (1,006 reviews)
"Customer service was excellent, and everyone was very helpful and friendly. Coin lockers and laundry room were very convenient!"

Reviewed on Apr 30, 2025

Cuore Nagasaki EkiMae
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

How much is the cheapest flight to Nagasaki Prefecture?
Your next vacation doesn’t have to blow a hole in your budget. Within the last seven days, the cheapest roundtrip flight to Nagasaki Prefecture cost $81. Find a cheap fare and spend the money you save on awesome experiences. This price was available on Travelocity for flights to Nagasaki Prefecture departing within the next year. Prices and availability are subject to change. Additional terms apply.
Which airlines fly to Nagasaki Prefecture?
With 20 airlines flying into Nagasaki Prefecture, finding the right fare should be a snap. If you’re planning to land in Nagasaki, choose the popular carrier, ANA. It operates about 424 flights to this wonderful city each month.
What is the cheapest month to fly to Nagasaki Prefecture?
Based on Travelocity’s direct return flight demand from January to December last year, May is the cheapest month to jump on a plane to Nagasaki Prefecture. Search for flights throughout this month and snag a terrific deal today.
How can I check my flight status to Nagasaki Prefecture?
“Trips” has you covered when it comes to the ins and outs of your flight to Nagasaki Prefecture. Travelocity’s handy portal lets you organize everything in the one place, from checking the status of your flight to making changes to your itinerary. Click on Trips at the top right of the Travelocity homepage and then create a free account in seconds. Or you can download the Travelocity app and access your information while you’re out and about. Whether you’ve got the family flying with you or you’re a lone adventurer, all your bookings will be at your fingertips.
How do I find the best deals on flights to Nagasaki Prefecture?
There are a few ways — book in advance, avoid busy periods and be flexible with your dates. If your dates aren’t set in stone, search for your flight to Nagasaki Prefecture on Travelocity and click on “Flexible dates” at the top of the page. This will help you locate any cheaper airfares on a nearby day. $81 was the lowest price paid for a roundtrip flight to Nagasaki Prefecture in the last seven days. This price was available on Travelocity for flights departing within the next year. Prices and availability are subject to change. Additional terms apply.
Why should I book my flight to Nagasaki Prefecture with Travelocity?
Track down cheap flights to Nagasaki Prefecture with Travelocity and begin planning your next escape. With 24/7 customer service throughout every step of the process and our Price Match Guarantee, we take the bother out of reserving cheap family flights, places to stay, activities and more. Get your hands on a great deal now and get set for an unforgettable adventure.
What are the most popular flight routes to Nagasaki Prefecture?
Whether you’re thinking about a whirlwind break or a long stay, we can help you lock in your flight to Nagasaki Prefecture. The most popular flight routes to this destination include:

  • Tokyo (HND-Haneda) to Nagasaki Airport (NGS) - 3,609 flights a month.
  • Osaka (ITM-Itami) to Nagasaki Airport (NGS) - 1,698 flights a month.
  • Tsushima (TSJ) to Nagasaki Airport (NGS) - 654 flights a month.

How much is a flight to Nagasaki Prefecture on average?
Roundtrip flights to Nagasaki Prefecture on our site cost between $81 and $1,267 in the last seven days. When you see a price that suits your budget, grab it quickly. Cheap deals don’t last long! These prices were available on Travelocity for flights departing within the next year. Prices and availability are subject to change. Additional terms apply.
How long is the average flight to Nagasaki Prefecture?
Your departure point will usually dictate how much time your direct flight to Nagasaki Prefecture will take. Here are a few of the major routes to Nagasaki Prefecture and average flight times:

  • Tokyo (HND-Haneda) to Nagasaki Airport (NGS) - 2 hours and 8 minutes
  • Osaka (ITM-Itami) to Nagasaki Airport (NGS) - 1 hour and 16 minutes
  • Tsushima (TSJ) to Nagasaki Airport (NGS) - 35 minutes

What can I expect on a flight to Nagasaki Prefecture?
What you can expect largely depends on your airline and the duration of your flight. Most airlines generally offer food, drinks and entertainment on long-haul services. Whether you’re searching for business class flights to Nagasaki Prefecture or cheap flights for family vacations, you’ll be looked after from the moment you take off to the minute you land.

Destinations in Nagasaki Prefecture

*Price based on the lowest price found within past 24 hours and based upon one night stay for two adults over the next thirty days. Prices and availability subject to change. Additional terms may apply.