
Cheap Flights to Nagasaki Prefecture from $101 (2026/2027)
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How Much Does it Cost To Fly To Nagasaki Prefecture?
Prices found within past 7 days. Prices and availability subject to change. Additional terms may apply.
HND
Haneda
FUK
Fukuoka
$201 Roundtrip, just found
$201
Roundtrip
just found
HND
Haneda
FUK
Fukuoka
$202 Roundtrip, found 5 days ago
$202
Roundtrip
found 5 days ago
HND
Haneda
KMJ
Kumamoto
$204 Roundtrip, found 1 day ago
$204
Roundtrip
found 1 day ago
HND
Haneda
NGS
Nagasaki
$204 Roundtrip, found 2 hours ago
$204
Roundtrip
found 2 hours ago
HND
Haneda
NGS
Nagasaki
$205 Roundtrip, found 2 hours ago
$205
Roundtrip
found 2 hours ago
HND
Haneda
NGS
Nagasaki
$206 Roundtrip, found 6 days ago
$206
Roundtrip
found 6 days ago
LAX
Los Angeles Intl.
FUK
Fukuoka
$896 Roundtrip, found 2 days ago
$896
Roundtrip
found 2 days ago
SEA
Seattle - Tacoma Intl.
FUK
Fukuoka
$896 Roundtrip, found 1 day ago
$896
Roundtrip
found 1 day ago
LAX
Los Angeles Intl.
NGS
Nagasaki
$903 Roundtrip, found 23 hours ago
$903
Roundtrip
found 23 hours ago
EWR
Newark Liberty Intl. Airport
FUK
Fukuoka
$1,351 Roundtrip, found 10 hours ago
$1,351
Roundtrip
found 10 hours ago
EWR
Newark Liberty Intl. Airport
FUK
Fukuoka
$1,373 Roundtrip, found 1 day ago
$1,373
Roundtrip
found 1 day ago
| Origin | Destination | Travel Dates | Flights From* |
|---|---|---|---|
| ITM | Fukuoka | August 29 to September 8 | $146 |
| ITM | Omura | September 2 to September 4 | $163 |
| ITM | Omura | September 2 to September 4 | $163 |
| ITM | Mashiki | August 18 to August 22 | $199 |
| ITM | Mashiki | August 18 to August 22 | $199 |
| HND | Fukuoka | August 24 to September 2 | $201 |
| HND | Fukuoka | August 24 to September 2 | $201 |
| HND | Mashiki | August 26 to September 2 | $204 |
| HND | Mashiki | August 26 to September 2 | $204 |
| HND | Omura | September 7 to September 10 | $204 |
| HND | Omura | September 7 to September 10 | $204 |
| TPE | Mashiki | September 2 to September 5 | $373 |
| HKG | Mashiki | September 5 to September 9 | $463 |
| LHR | Fukuoka | September 3 to September 10 | $1,184 |
| LHR | Omura | July 25 to August 9 | $1,934 |
| Origin | Destination | Travel Dates | Flights From* |
|---|---|---|---|
| ITM | Fukuoka | June 28 to July 4 | $224 |
| ITM | Fukuoka | June 28 to July 4 | $224 |
| ITM | Omura | June 27 to June 27 | $292 |
| ITM | Omura | June 27 to June 27 | $292 |
| HND | Fukuoka | June 28 to July 19 | $356 |
| HND | Fukuoka | June 28 to July 19 | $356 |
| TPE | Fukuoka | June 27 to June 30 | $469 |
| HKG | Fukuoka | June 27 to July 1 | $537 |
Travelers ❤️ These Nagasaki Prefecture 🏨

Hotel Nikko Huis Ten Bosch
6 Huis Ten Bosch Sasebo Nagasaki-ken
Stay at this hotel in Sasebo. Enjoy free WiFi, 2 restaurants, and breakfast (surcharge). Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Huis Ten Bosch and Mukyudo are located nearby.

Hotel Forza Nagasaki
4-11 Hamamachi Nagasaki
Stay at this hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and a 24-hour front desk. Our guests praise the helpful staff in our reviews. Popular attractions Hamanomachi Arcade and The Museum of Nagasaki Ryoma Path are located nearby.
9/10 Wonderful! (1,000 reviews)
"It's located in the city centre and we found it very convenient. The room is quite good and not that small, which is out of expected."
Reviewed on Jun 13, 2026

Hotel Okura JR Huis Ten Bosch
10 Huis Ten Bosch cho Sasebo Nagasaki
Stay at this hotel in Sasebo. Enjoy free WiFi, 3 restaurants, and hot springs on site. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions Huis Ten Bosch and Mukyudo are located nearby.
9.2/10 Wonderful! (1,000 reviews)
"Hot springs (onsen) were excellent"
Reviewed on Jun 23, 2026
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Toyoko Inn Tsushima Izuhara
771-1 Imayashiki, Izuhara-machi Tsushima Nagasaki
Book a stay at this business-friendly hotel in Tsushima. Enjoy free breakfast, free WiFi, and parking (surcharge). Popular attraction Tsushima Folk History Museum is located nearby.
8.8/10 Excellent! (911 reviews)
"Staff was very helpful with check-in. Breakfast was a usual Asian breakfast. It was prepared well and tasted good."
Reviewed on Apr 10, 2026
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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